Rebuild dev docs at master=425407b

Author: sklearn-ci

dev/_sources/auto_examples/ensemble/plot_bias_variance.txt

@@ -83,6 +83,6 @@ References
 .. literalinclude:: plot_bias_variance.py
     :lines: 64-
 
-**Total running time of the example:**  2.29 seconds
-( 0 minutes  2.29 seconds)
+**Total running time of the example:**  2.34 seconds
+( 0 minutes  2.34 seconds)
 

dev/auto_examples/ensemble/plot_bias_variance.html

@@ -354,8 +354,8 @@ <h2>References<a class="headerlink" href="#references" title="Permalink to this
 <a href="http://matplotlib.org/api/pyplot_api.html#matplotlib.pyplot.show"><span class="n">plt</span><span class="o">.</span><span class="n">show</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<p><strong>Total running time of the example:</strong>  2.29 seconds
-( 0 minutes  2.29 seconds)</p>
+<p><strong>Total running time of the example:</strong>  2.34 seconds
+( 0 minutes  2.34 seconds)</p>
 </div>
 </div>
 

dev/auto_examples/ensemble/plot_partial_dependence.html

@@ -176,7 +176,7 @@
 (see <a class="reference internal" href="../../modules/generated/sklearn.ensemble.GradientBoostingRegressor.html#sklearn.ensemble.GradientBoostingRegressor.feature_importances_" title="sklearn.ensemble.GradientBoostingRegressor.feature_importances_"><tt class="xref py py-attr docutils literal"><span class="pre">feature_importances_</span></tt></a>).</p>
 <p>This example shows how to obtain partial dependence plots from a
 <a class="reference internal" href="../../modules/generated/sklearn.ensemble.GradientBoostingRegressor.html#sklearn.ensemble.GradientBoostingRegressor" title="sklearn.ensemble.GradientBoostingRegressor"><tt class="xref py py-class docutils literal"><span class="pre">GradientBoostingRegressor</span></tt></a> trained on the California
-housing dataset. The example is taken from <a class="reference internal" href="../../modules/ensemble.html#htf2009" id="id2">[HTF2009]</a>.</p>
+housing dataset. The example is taken from <a class="reference internal" href="#htf2009" id="id2">[HTF2009]</a>.</p>
 <p>The plot shows four one-way and one two-way partial dependence plots.
 The target variables for the one-way PDP are:
 median income (<cite>MedInc</cite>), avg. occupants per household (<cite>AvgOccup</cite>),

dev/modules/generated/sklearn.calibration.CalibratedClassifierCV.html

@@ -237,31 +237,31 @@ <h1><a class="reference internal" href="../classes.html#module-sklearn.calibrati
 </tbody>
 </table>
 <p class="rubric">References</p>
-<table class="docutils citation" frame="void" id="r108" rules="none">
+<table class="docutils citation" frame="void" id="r1" rules="none">
 <colgroup><col class="label" /><col /></colgroup>
 <tbody valign="top">
-<tr><td class="label"><a class="fn-backref" href="#id1">[R108]</a></td><td>Obtaining calibrated probability estimates from decision trees
+<tr><td class="label"><a class="fn-backref" href="#id1">[R1]</a></td><td>Obtaining calibrated probability estimates from decision trees
 and naive Bayesian classifiers, B. Zadrozny &amp; C. Elkan, ICML 2001</td></tr>
 </tbody>
 </table>
-<table class="docutils citation" frame="void" id="r109" rules="none">
+<table class="docutils citation" frame="void" id="r2" rules="none">
 <colgroup><col class="label" /><col /></colgroup>
 <tbody valign="top">
-<tr><td class="label"><a class="fn-backref" href="#id2">[R109]</a></td><td>Transforming Classifier Scores into Accurate Multiclass
+<tr><td class="label"><a class="fn-backref" href="#id2">[R2]</a></td><td>Transforming Classifier Scores into Accurate Multiclass
 Probability Estimates, B. Zadrozny &amp; C. Elkan, (KDD 2002)</td></tr>
 </tbody>
 </table>
-<table class="docutils citation" frame="void" id="r110" rules="none">
+<table class="docutils citation" frame="void" id="r3" rules="none">
 <colgroup><col class="label" /><col /></colgroup>
 <tbody valign="top">
-<tr><td class="label"><a class="fn-backref" href="#id3">[R110]</a></td><td>Probabilistic Outputs for Support Vector Machines and Comparisons to
+<tr><td class="label"><a class="fn-backref" href="#id3">[R3]</a></td><td>Probabilistic Outputs for Support Vector Machines and Comparisons to
 Regularized Likelihood Methods, J. Platt, (1999)</td></tr>
 </tbody>
 </table>
-<table class="docutils citation" frame="void" id="r111" rules="none">
+<table class="docutils citation" frame="void" id="r4" rules="none">
 <colgroup><col class="label" /><col /></colgroup>
 <tbody valign="top">
-<tr><td class="label"><a class="fn-backref" href="#id4">[R111]</a></td><td>Predicting Good Probabilities with Supervised Learning,
+<tr><td class="label"><a class="fn-backref" href="#id4">[R4]</a></td><td>Predicting Good Probabilities with Supervised Learning,
 A. Niculescu-Mizil &amp; R. Caruana, ICML 2005</td></tr>
 </tbody>
 </table>

dev/modules/generated/sklearn.cluster.AgglomerativeClustering.html

@@ -172,7 +172,7 @@
 <h1><a class="reference internal" href="../classes.html#module-sklearn.cluster" title="sklearn.cluster"><tt class="xref py py-mod docutils literal"><span class="pre">sklearn.cluster</span></tt></a>.AgglomerativeClustering<a class="headerlink" href="#sklearn-cluster-agglomerativeclustering" title="Permalink to this headline">¶</a></h1>
 <dl class="class">
 <dt id="sklearn.cluster.AgglomerativeClustering">
-<em class="property">class </em><tt class="descclassname">sklearn.cluster.</tt><tt class="descname">AgglomerativeClustering</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x2aed1b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L583"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.AgglomerativeClustering" title="Permalink to this definition">¶</a></dt>
+<em class="property">class </em><tt class="descclassname">sklearn.cluster.</tt><tt class="descname">AgglomerativeClustering</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x28801b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L583"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.AgglomerativeClustering" title="Permalink to this definition">¶</a></dt>
 <dd><p>Agglomerative Clustering</p>
 <p>Recursively merges the pair of clusters that minimally increases
 a given linkage distance.</p>
@@ -284,7 +284,7 @@ <h1><a class="reference internal" href="../classes.html#module-sklearn.cluster"
 </table>
 <dl class="method">
 <dt id="sklearn.cluster.AgglomerativeClustering.__init__">
-<tt class="descname">__init__</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x2aed1b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L660"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.AgglomerativeClustering.__init__" title="Permalink to this definition">¶</a></dt>
+<tt class="descname">__init__</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x28801b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L660"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.AgglomerativeClustering.__init__" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="method">

dev/modules/generated/sklearn.cluster.FeatureAgglomeration.html

@@ -172,7 +172,7 @@
 <h1><a class="reference internal" href="../classes.html#module-sklearn.cluster" title="sklearn.cluster"><tt class="xref py py-mod docutils literal"><span class="pre">sklearn.cluster</span></tt></a>.FeatureAgglomeration<a class="headerlink" href="#sklearn-cluster-featureagglomeration" title="Permalink to this headline">¶</a></h1>
 <dl class="class">
 <dt id="sklearn.cluster.FeatureAgglomeration">
-<em class="property">class </em><tt class="descclassname">sklearn.cluster.</tt><tt class="descname">FeatureAgglomeration</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x2aed1b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L746"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.FeatureAgglomeration" title="Permalink to this definition">¶</a></dt>
+<em class="property">class </em><tt class="descclassname">sklearn.cluster.</tt><tt class="descname">FeatureAgglomeration</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x28801b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L746"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.FeatureAgglomeration" title="Permalink to this definition">¶</a></dt>
 <dd><p>Agglomerate features.</p>
 <p>Similar to AgglomerativeClustering, but recursively merges features
 instead of samples.</p>
@@ -293,7 +293,7 @@ <h1><a class="reference internal" href="../classes.html#module-sklearn.cluster"
 </table>
 <dl class="method">
 <dt id="sklearn.cluster.FeatureAgglomeration.__init__">
-<tt class="descname">__init__</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x2aed1b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L660"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.FeatureAgglomeration.__init__" title="Permalink to this definition">¶</a></dt>
+<tt class="descname">__init__</tt><big>(</big><em>n_clusters=2</em>, <em>affinity='euclidean'</em>, <em>memory=Memory(cachedir=None)</em>, <em>connectivity=None</em>, <em>compute_full_tree='auto'</em>, <em>linkage='ward'</em>, <em>pooling_func=&lt;function mean at 0x28801b8&gt;</em><big>)</big><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/425407b/sklearn/cluster/hierarchical.py#L660"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#sklearn.cluster.FeatureAgglomeration.__init__" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="method">

dev/modules/generated/sklearn.cross_validation.KFold.html

@@ -246,10 +246,6 @@ <h2>Examples using <tt class="docutils literal"><span class="pre">sklearn.cross_
 <a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_gradient_boosting_oob.html"><img alt="../../_images/plot_gradient_boosting_oob1.png" src="../../_images/plot_gradient_boosting_oob1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_gradient_boosting_oob.html#example-ensemble-plot-gradient-boosting-oob-py"><em>Gradient Boosting Out-of-Bag estimates</em></a></p>
 </div>
-</div><div class="thumbnailContainer" tooltip="Out-of-bag (OOB) estimates can be a useful heuristic to estimate the "optimal" number of boosti..."><div class="figure">
-<a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_gradient_boosting_oob.html"><img alt="../../_images/plot_gradient_boosting_oob1.png" src="../../_images/plot_gradient_boosting_oob1.png" /></a>
-<p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_gradient_boosting_oob.html#example-ensemble-plot-gradient-boosting-oob-py"><em>Gradient Boosting Out-of-Bag estimates</em></a></p>
-</div>
 </div><div class="thumbnailContainer" tooltip="A tutorial exercise which uses cross-validation with linear models."><div class="figure">
 <a class="reference external image-reference" href="./../../auto_examples/exercises/plot_cv_diabetes.html"><img alt="../../_images/plot_cv_diabetes1.png" src="../../_images/plot_cv_diabetes1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/exercises/plot_cv_diabetes.html#example-exercises-plot-cv-diabetes-py"><em>Cross-validation on diabetes Dataset Exercise</em></a></p>

dev/modules/generated/sklearn.cross_validation.train_test_split.html

@@ -276,14 +276,6 @@ <h2>Examples using <tt class="docutils literal"><span class="pre">sklearn.cross_
 <a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_partial_dependence.html"><img alt="../../_images/plot_partial_dependence1.png" src="../../_images/plot_partial_dependence1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_partial_dependence.html#example-ensemble-plot-partial-dependence-py"><em>Partial Dependence Plots</em></a></p>
 </div>
-</div><div class="thumbnailContainer" tooltip="Partial dependence plots show the dependence between the target function [1]_ and a set of 'tar..."><div class="figure">
-<a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_partial_dependence.html"><img alt="../../_images/plot_partial_dependence1.png" src="../../_images/plot_partial_dependence1.png" /></a>
-<p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_partial_dependence.html#example-ensemble-plot-partial-dependence-py"><em>Partial Dependence Plots</em></a></p>
-</div>
-</div><div class="thumbnailContainer" tooltip="Transform your features into a higher dimensional, sparse space. Then train a linear model on t..."><div class="figure">
-<a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_feature_transformation.html"><img alt="../../_images/plot_feature_transformation1.png" src="../../_images/plot_feature_transformation1.png" /></a>
-<p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_feature_transformation.html#example-ensemble-plot-feature-transformation-py"><em>Feature transformations with ensembles of trees</em></a></p>
-</div>
 </div><div class="thumbnailContainer" tooltip="Transform your features into a higher dimensional, sparse space. Then train a linear model on t..."><div class="figure">
 <a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_feature_transformation.html"><img alt="../../_images/plot_feature_transformation1.png" src="../../_images/plot_feature_transformation1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_feature_transformation.html#example-ensemble-plot-feature-transformation-py"><em>Feature transformations with ensembles of trees</em></a></p>
@@ -292,10 +284,6 @@ <h2>Examples using <tt class="docutils literal"><span class="pre">sklearn.cross_
 <a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_gradient_boosting_oob.html"><img alt="../../_images/plot_gradient_boosting_oob1.png" src="../../_images/plot_gradient_boosting_oob1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_gradient_boosting_oob.html#example-ensemble-plot-gradient-boosting-oob-py"><em>Gradient Boosting Out-of-Bag estimates</em></a></p>
 </div>
-</div><div class="thumbnailContainer" tooltip="Out-of-bag (OOB) estimates can be a useful heuristic to estimate the "optimal" number of boosti..."><div class="figure">
-<a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_gradient_boosting_oob.html"><img alt="../../_images/plot_gradient_boosting_oob1.png" src="../../_images/plot_gradient_boosting_oob1.png" /></a>
-<p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_gradient_boosting_oob.html#example-ensemble-plot-gradient-boosting-oob-py"><em>Gradient Boosting Out-of-Bag estimates</em></a></p>
-</div>
 </div><div class="thumbnailContainer" tooltip="An example showing how different online solvers perform on the hand-written digits dataset."><div class="figure">
 <a class="reference external image-reference" href="./../../auto_examples/linear_model/plot_sgd_comparison.html"><img alt="../../_images/plot_sgd_comparison1.png" src="../../_images/plot_sgd_comparison1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/linear_model/plot_sgd_comparison.html#example-linear-model-plot-sgd-comparison-py"><em>Comparing various online solvers</em></a></p>

dev/modules/generated/sklearn.datasets.load_boston.html

@@ -239,10 +239,6 @@ <h2>Examples using <tt class="docutils literal"><span class="pre">sklearn.datase
 <a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_gradient_boosting_regression.html"><img alt="../../_images/plot_gradient_boosting_regression1.png" src="../../_images/plot_gradient_boosting_regression1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_gradient_boosting_regression.html#example-ensemble-plot-gradient-boosting-regression-py"><em>Gradient Boosting regression</em></a></p>
 </div>
-</div><div class="thumbnailContainer" tooltip="Demonstrate Gradient Boosting on the Boston housing dataset."><div class="figure">
-<a class="reference external image-reference" href="./../../auto_examples/ensemble/plot_gradient_boosting_regression.html"><img alt="../../_images/plot_gradient_boosting_regression1.png" src="../../_images/plot_gradient_boosting_regression1.png" /></a>
-<p class="caption"><a class="reference internal" href="../../auto_examples/ensemble/plot_gradient_boosting_regression.html#example-ensemble-plot-gradient-boosting-regression-py"><em>Gradient Boosting regression</em></a></p>
-</div>
 </div><div class="thumbnailContainer" tooltip="Use SelectFromModel meta-transformer along with Lasso to select the best couple of features fro..."><div class="figure">
 <a class="reference external image-reference" href="./../../auto_examples/feature_selection/plot_select_from_model_boston.html"><img alt="../../_images/plot_select_from_model_boston1.png" src="../../_images/plot_select_from_model_boston1.png" /></a>
 <p class="caption"><a class="reference internal" href="../../auto_examples/feature_selection/plot_select_from_model_boston.html#example-feature-selection-plot-select-from-model-boston-py"><em>Feature selection using SelectFromModel and LassoCV</em></a></p>